BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F11SP1|AL429784
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1735 0.0
>3x_Contig1806
Length = 53694
Score = 1735 bits (862), Expect = 0.0
Identities = 889/912 (97%)
Strand = Plus / Minus
Query: 1 atctttgcatccaagtataggaggagtcaagtcaagaaactagctgaattaccaagcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8783 atctttgcatccaagtataggaggagtcaagtcaagaaactagctgaattaccaagcatt 8724
Query: 61 tttgatgaacatgaagcccgtsatttatatttygcaattgcagaattagctgaaacagaa 120
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 8723 tttgatgaacatgaagcccgtgatttatattttgcaattgcagaattagctgaaacagaa 8664
Query: 121 caacttcaccctaaggtggttaamgctgctctgttgaaccgtggtgcagaagctgtaaga 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 8663 caacttcaccctaaggtggttaaagctgctctgttgaaccgtggtgcagaagctgtaaga 8604
Query: 181 cgtaccattaamttmagagaggtcgccgttcaaattgagatcttgtataasamtgggtcc 240
||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 8603 cgtaccattaaattaagagaggtcgccgttcaaattgagatcttgtataagaatgggtcc 8544
Query: 241 gttgatgataagtattggcaaaggtaccaaaacgaaatgaaattggttgatcttgaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8543 gttgatgataagtattggcaaaggtaccaaaacgaaatgaaattggttgatcttgaattg 8484
Query: 301 aaaagttgcatcgaagaagcagaaagattacmaccagattggccccmagcatttgtgaat 360
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 8483 aaaagttgcatcgaagaagcagaaagattacaaccagattggccccaagcatttgtgaat 8424
Query: 361 ctatgtmgagamatctgtttcaaccaagctttacaaagacgttacgattccattttagat 420
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8423 ctatgtagagaaatctgtttcaaccaagctttacaaagacgttacgattccattttagat 8364
Query: 421 agamagamcattttccaaaamctataccaattgamgttggatgacaacggtaaactaatt 480
||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 8363 agaaagaacattttccaaaaactataccaattgaagttggatgacaacggtaaactaatt 8304
Query: 481 cagtmatgataccacgtagatacagttgagttttctctctgggtatttsctagagattat 540
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 8303 cagtaatgataccacgtagatacagttgagttttctctctgggtatttgctagagattat 8244
Query: 541 gtacactatacaammcacaatataatsctagatgctactgaccccatacgttttagagac 600
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8243 gtacactatacaaaaaacaatataatgctagatgctactgaccccatacgttttagagac 8184
Query: 601 tagttccttttaccttttttcttactcacaacttggaattcccaatcatcagcgcttccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8183 tagttccttttaccttttttcttactcacaacttggaattcccaatcatcagcgcttccc 8124
Query: 661 tgtggaagagcaagagcttctgaccatgttaamggctcattcaatgatttctcgcattca 720
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 8123 tgtggaagagcaagagcttctgaccatgttaaaggatcattcaatgatttctcgcattca 8064
Query: 721 atacgtcttttaataaattctgatgcaaaggaacgaccttccatcactgaactgttagcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8063 atacgtcttttaataaattctgatgcaaaggaacgaccttccatcactgaactgttagcg 8004
Query: 781 tagatagtatcagagatgatttccttggaatccatgcttggtggtaaagagagtaacatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8003 tagatagtatcagagatgatttccttggaatccatgcttggtggtaaagagagtaacatc 7944
Query: 841 tctaaaacagaatccactttaacaccaggtgctagtttcatttgagatctacaccagctc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7943 tctaaaacagaatccactttaacaccaggtgctagtttcatttgagatctacaccagctc 7884
Query: 901 aaaaattgcctc 912
||||||||||||
Sbjct: 7883 aaaaattgcctc 7872
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5883
Number of Sequences: 1807
Number of extensions: 5883
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)